Identification of a Potential Target of Capsaicin by Computational Target Fishing.

نویسندگان

  • Xuan-Yi Ye
  • Qing-Zhi Ling
  • Shao-Jun Chen
چکیده

Capsaicin, the component responsible for the pungency of chili peppers, shows beneficial effects in many diseases, although the underlying mechanisms remain unclear. In the present study, the potential targets of capsaicin were predicted using PharmMapper and confirmed via chemical-protein interactome (CPI) and molecular docking. Carbonic anhydrase 2 was identified as the main disease-related target, with the pharmacophore model matching well with the molecular features of capsaicin. The relation was confirmed by CPI and molecular docking and supported by previous research showing that capsaicin is a potent inhibitor of carbonic anhydrase isoenzymes. The present study provides a basis for understanding the mechanisms of action of capsaicin or those of other natural compounds.

برای دانلود متن کامل این مقاله و بیش از 32 میلیون مقاله دیگر ابتدا ثبت نام کنید

ثبت نام

اگر عضو سایت هستید لطفا وارد حساب کاربری خود شوید

منابع مشابه

Computational Identification of Micro RNAs and Their Transcript Target(s) in Field Mustard (Brassica rapa L.)

Background: Micro RNAs (miRNAs) are a pivotal part of non-protein-coding endogenous small RNA molecules that regulate the genes involved in plant growth and development, and respond to biotic and abiotic environmental stresses posttranscriptionally.Objective: In the present study, we report the results of a systemic search for identifi cation of new miRNAs in B. rapa using homology-based ...

متن کامل

Capsaicin: Its Biological Activities and in Silico Target Fishing.

Capsicum annuum L. is a rich source of capsaicin, an alkaloid, which is a very pungent compound. Due to ever growing need of capsaicin, an extensive research on its efficient cultivation as well as chemical synthesis is underway. Owing to the pungent nature of capsaicin, its analogous molecules without pungent effect are being explored. The objective of this descriptive review is to comprehensi...

متن کامل

Genome-wide computational prediction of miRNAs in severe acute respiratory syndrome coronavirus 2 (SARS-CoV-2) revealed target genes involved in pulmonary vasculature and antiviral innate immunity

The current outbreak of severe acute respiratory syndrome coronavirus 2 (SARS-CoV-2)in China threatened humankind worldwide. The coronaviruses contains the largest RNA genome among all other known RNA viruses, therefore the disease etiology can be understood by analyzing the genome sequence of SARS-CoV-2. In this study, we used an ab-intio based computational tool VMir to scan the complete geno...

متن کامل

Estimation of target hazard quotients for metals by consumption of fish in the North Coast of the Persian Gulf, Iran

In the residential area of the North Coast of the Persian Gulf, consumption of fish is a possible source of exposure to heavy metals and other pollutants, all of which may act as potential risk factors for serious syndromes and fatal diseases. Health risks associated with Pb, Cd, and Hg were assessed based on the target hazard quotients (THQ), which can be derived from concentrations of heavy m...

متن کامل

Salient regions detection in satellite images using the combination of MSER local features detector and saliency models

Nowadays, due to quality development of satellite images, automatic target detection on these images has been attracted many researchers' attention. Remote-sensing images follow various geospatial targets; these targets are generally man-made and have a distinctive structure from their surrounding areas. Different methods have been developed for automatic target detection.  In most of these met...

متن کامل

ذخیره در منابع من


  با ذخیره ی این منبع در منابع من، دسترسی به آن را برای استفاده های بعدی آسان تر کنید

برای دانلود متن کامل این مقاله و بیش از 32 میلیون مقاله دیگر ابتدا ثبت نام کنید

ثبت نام

اگر عضو سایت هستید لطفا وارد حساب کاربری خود شوید

عنوان ژورنال:
  • Evidence-based complementary and alternative medicine : eCAM

دوره 2015  شماره 

صفحات  -

تاریخ انتشار 2015